Discovery of novel Myc-Max heterodimer disruptors with a three-dimensional pharmacophore model

J Med Chem. 2009 Mar 12;52(5):1247-50. doi: 10.1021/jm801278g.

Abstract

A three-dimensional pharmacophore model was generated utilizing a set of known inhibitors of c-Myc-Max heterodimer formation. The model successfully identified a set of structurally diverse compounds with potential inhibitory activity against c-Myc. Nine compounds were tested in vitro, and four displayed affinities in the micromolar range and growth inhibitory activity against c-Myc-overexpressing cells. These studies demonstrate the applicability of pharmacophore modeling to the identification of novel and potentially more puissant inhibitors of the c-Myc oncoprotein.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Basic Helix-Loop-Helix Leucine Zipper Transcription Factors / chemistry*
  • Basic Helix-Loop-Helix Leucine Zipper Transcription Factors / metabolism
  • Benzofurans / chemistry
  • Benzofurans / pharmacology
  • Cell Line
  • Cell Proliferation / drug effects
  • Circular Dichroism
  • Electrophoretic Mobility Shift Assay
  • Fibroblasts / cytology
  • Fibroblasts / drug effects
  • Fibroblasts / metabolism
  • Gene Knockout Techniques
  • HL-60 Cells
  • HMGA1b Protein / biosynthesis
  • HMGA1b Protein / genetics
  • Humans
  • Models, Molecular*
  • Protein Binding
  • Protein Multimerization
  • Proto-Oncogene Proteins c-myc / chemistry*
  • Proto-Oncogene Proteins c-myc / genetics
  • Proto-Oncogene Proteins c-myc / metabolism
  • Pyridines / chemistry
  • Pyridines / pharmacology
  • Pyrrolidines / chemistry
  • Pyrrolidines / pharmacology
  • Rats
  • Thiazoles / chemistry
  • Thiazoles / pharmacology

Substances

  • Basic Helix-Loop-Helix Leucine Zipper Transcription Factors
  • Benzofurans
  • Proto-Oncogene Proteins c-myc
  • Pyridines
  • Pyrrolidines
  • Thiazoles
  • HMGA1b Protein